Publications

Protein Microcharacterization

1. Pi, J., Bai, Y., Reece, J.M., Williams, J., Liu, D., Freeman, M.L., Fahl, W.E., Shugar, D., Liu, J., Qu, W., Collins, S., and Waalkes, M.P. in press Free Radical Biol. Med. "Molecular Mechanism of Human Nrf2 Activation and Degradation: Role of Sequential Phosphorylation by Protein Kinase CK2"
2. Lemieux, G.A., Blumenkron, F., Yeung, N., Zhou, P., Williams, J., Grammer, A.C., Petrovich, R., Lipsky, P.E., Moss M.L., Werb, Z. in press J. Biol. Chem. "The Low Affinity IgE Receptor (CD23) is Cleaved by the Metalloproteinase ADAM10"
3. Vitorino, R., Lobo, M.J.C., Williams, J.G., Ferrer-Correia, A.J., Tomer, K.B., Duarte, J., Pedro M. Domingues, P.M., and Amado, F.M.L. in press Biomed. Chrom. "Peptidomic Analysis of Human Acquired Enamel Pellicle"
4. Chu, P., Huang, T., Williams, J., and Stafford, D.W. (2006) P.N.A.S. 103(51), 19308-19313 "Purified VKOR alone is sufficient for conversion of vitamin K epoxide to vitamin K and vitamin K to vitamin KH2"
5. Williams, J.G., Hoie, C., Norris, P.J., Zolla-Pazner, S., Tomer, K.B. (2006) J. Am. Soc. Mass Spectrom. 17(11), 1560-1569 "The Antigenic Determinants on HIV p24 for CD4+ T Cell Inhibiting Antibodies as Determined by Limited Proteolysis, Chemical Modification, and Mass Spectrometry"
6. Y., Wenjie, R., Sangaiah, Degen, D.E., Gold, A., Jayaraj, K., Koshlap, K.M., Boysen, G., Williams, J., Tomer, K.B., and Ball, L. (2006) Chem. Res. Toxicol. 19(4), 506-510 "A 2-Iminohydantoin from the Oxidation of Guanine"
7. Qian X., Mitchell J., Wei S.J., Williams J., Petrovich R.M., Shears S.B. (2005) Biochem. J. 389(2), 389-395 "The Ins(1,3,4)P 3 5/6-kinase / Ins(3,4,5,6)P 4 1-kinase is not a protein kinase." 
8. Vitorino R, Lobo MJ, Duarte J, Ferrer-Correia AJ, Tomer KB, Dubin JR, Domingues PM, Amado FM. (2004) Biochem. Biophys. Res. Commun. 23;320(2):342-6 "In Vitro Hydroxyapatite Adsorbed Salivary Proteins."
9. Vitorino R, Lobo MJ, Ferrer-Correira AJ, Dubin JR, Tomer KB, Domingues PM, Amado FM. (2004) Proteomics. 4(4):1109-15 "Identification of Human Whole Saliva Protein Components Using Proteomics."
10. Iida, M., Anna, C.H., Hartis, J., Bruno, M., Wetmore, B., Dubin, J.R., Sieber, S., Bennett, L., Cunningham, M.L., Paules, R.S., Tomer, K.B., Houle, C.D., Merrick, B.A., Sills, R.C., Devereux, T.R. (2003) Carcinogenesis 24:757-770 "Changes in global gene and protein expression during early mouse liver carcinogenesis induced by non-genotoxic model carcinogens Oxazepam and Wyeth-14,643."
11. Hall, M.C., Shcherbakova, P., Fortune, J.M., Borchers, C.H., Dial, J.M., Tomer, K.B., Kunkel, T.A. (2003) Nuc. Ac. Res. 31(8): 2025-2034 "DNA binding by yeast Mlh1 and Pms1: Implications for DNA mismatch repair."
12. Bruno, M.E., Borchers, C.H., Dial, J.M., Walker, N.J., Hartis, J.E., Wetmore, B.E., Barrett, J.C., Tomer, K.B., Merrick, B.A. (2002) Arch. Biochem. Biophys. 406(2):153-164 "Effects of TCDD upon Iβ and IKK subunits localized in microsomes by proteomics."
13. Wine, R.N., Parker, C.E., Dial, J.M., Tomer, K.B., Borchers, C.H. (2002) Anal. Chem. 74(9):1939-1945 "Identification of components of protein complexes using a fluorescent photo-crosslinker and mass spectrometry."
14. Merrick, B.A., Zhou, W., Martin, K.J., Jeyarajah, S., Parker, C.E., Selkirk, J.K., Tomer, K.B., Borchers, C.H. (2001) Biochem. 40:4053-4066 "Site-specific phosphorylation of human p53 protein determined by mass spectrometry."
15. Petrotchenko, E.V., Pedersen, L.C., Borchers, C.H., Tomer, K.B., Negishi, M. (2001) FEBS Lett. 490:39-43 "The dimerization motif of cytosolic sulfotransferases."
16. Borchers, C., Peter, J.F., Hall, M.C., Kunkel, T.A., Tomer, K.B. (2000) Anal. Chem. 72:1163-1168 "Identification of In-Gel Digested Proteins by Complementary Peptide-Mass Fingerprinting and Tandem Mass Spectrometry Data Obtained on an Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometer."

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